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Payroll Center

End-to-end monthly payroll processing with full Indian statutory compliance -- PF, ESI, Professional Tax, and TDS handled automatically.

Payroll Center — compute payroll, preview the draft grid, and approve runs.
Payroll Center — compute payroll, preview the draft grid, and approve runs.

The Payroll Center is the heart of Fuzen HRMS Pro's compensation management. It handles everything from computing monthly salaries to generating statutory filings -- all in one place. You can reach it by clicking Payroll Center in the sidebar or navigating to /a/payroll_center.

The module is organized into three tabs:

  • Run Payroll -- compute, review, and approve the current month's payroll
  • Payroll History -- view past payroll runs, download payslips, and export statutory files
  • Salary Structures -- define reusable templates that control how CTC is split into salary components

Tab 1: Run Payroll

This is where you process each month's payroll. The tab gives you a complete view of what every employee will be paid, broken down by earnings and deductions.

Summary Cards

Four summary cards at the top of the page give you an at-a-glance picture of the current payroll run.

Total Employees

The number of active employees included in this payroll run. Employees on unpaid leave or terminated before the pay period are excluded.

Total Gross

The sum of all gross salaries (Basic + HRA + Conveyance + Medical + Special allowances) for every employee in the run.

Total Deductions

The combined total of all statutory deductions: PF (employee share), ESI (employee share), Professional Tax, TDS, and any other configured deductions.

Total Net Pay

The final take-home amount across all employees -- calculated as Total Gross minus Total Deductions. This is what you'll disburse.

Controls

Above the preview grid, you'll find the controls that drive the payroll process:

  • Month / Year Picker -- select the pay period you want to process. The system defaults to the current month, but you can pick any previous month if you need to run a late payroll.
  • Compute Payroll -- click this button to calculate salaries for all active employees. The system uses each employee's CTC, assigned salary structure, attendance records, approved leave, and statutory rules to produce the full breakdown.
  • Approve & Lock Run -- once you've reviewed the numbers and confirmed everything is correct, click this to finalize the payroll. A locked run cannot be edited or recomputed.
Important: Always review the Preview Grid carefully before approving. Once a payroll run is locked, it cannot be edited. If you spot errors in an employee's salary, deductions, or attendance, fix them before clicking Approve & Lock Run.

Preview Grid

After you click Compute Payroll, the Preview Grid displays a detailed per-employee breakdown. Each row shows one employee; each column shows a salary component or deduction.

Column What It Shows
Employee Name Full name of the employee
Basic Basic salary component -- the foundation for PF and gratuity calculations
HRA House Rent Allowance -- typically 40-50% of Basic, used for rent-related tax exemptions
Conveyance Conveyance / transport allowance for commuting expenses
Medical Medical allowance for healthcare-related expenses
Special Special / flexible allowance -- the balancing component that absorbs the remainder of CTC after other heads are allocated
Gross Total of all earning components (Basic + HRA + Conveyance + Medical + Special)
PF (Employee) Employee's Provident Fund contribution -- 12% of Basic, capped at Rs.1,800/month when Basic is Rs.15,000 or below
ESI (Employee) Employee State Insurance contribution -- 0.75% of Gross, applicable only when monthly Gross is Rs.21,000 or below
Professional Tax State-specific deduction -- varies by state (typically Rs.200/month in most states)
TDS Income Tax Deducted at Source -- calculated based on the employee's projected annual income, chosen tax regime, and investment declarations
Net Pay Final take-home pay: Gross minus all deductions (PF + ESI + Professional Tax + TDS)
Tip Make sure attendance is marked and leave is processed for the month before computing payroll. The system factors in loss-of-pay for unmarked or absent days, so incomplete attendance data will produce incorrect salary figures.

How to Run Monthly Payroll

Follow these steps each month to compute, review, and finalize payroll for your organization.

1

Navigate to Payroll Center from the sidebar. You'll land on the Run Payroll tab by default.

2

Select the Month and Year for the pay period using the picker at the top. Verify you have the correct period selected -- processing the wrong month is a common mistake.

3

Click Compute Payroll. The system calculates salary for all active employees based on their CTC, assigned salary structure, attendance records, approved leave, and statutory rules. This may take a few seconds depending on your team size.

4

Review the Preview Grid carefully. Check each employee's earnings breakdown (Basic, HRA, Conveyance, Medical, Special) and deductions (PF, ESI, Professional Tax, TDS). Look for anything unusual -- a zero where there should be a value, or a deduction that seems too high or too low.

5

Verify the summary cards at the top: Total Employees, Total Gross, Total Deductions, and Total Net Pay. Cross-check the employee count against your active roster and confirm the totals look reasonable compared to previous months.

6

If everything looks correct, click Approve & Lock Run. The system will ask you to confirm -- this action is irreversible. Once confirmed, the payroll run is locked and no further edits can be made.

7

Once locked, payslips are automatically generated for each employee. You can find them in the Payroll History tab along with bank files and statutory export options.

Indian Statutory Deductions Explained

Fuzen HRMS Pro automatically calculates all mandatory statutory deductions under Indian labor law. Here's what each one means and how it's applied.

Deduction Rate Applicability Paid By
PF (Provident Fund) 12% of Basic All employees (statutory for Basic up to Rs.15,000; voluntary contributions allowed above this threshold) Employee 12% + Employer 12%
ESI (Employee State Insurance) 0.75% of Gross Only applicable when monthly Gross salary is Rs.21,000 or below Employee 0.75% + Employer 3.25%
Professional Tax Varies by state All salaried employees (rates differ by state -- typically Rs.200/month in most states) Employee only
TDS (Tax Deducted at Source) Per income tax slabs All employees whose projected annual income exceeds the basic exemption limit Employee only
About TDS: TDS is calculated based on the employee's annual projected income and their investment declarations (Section 80C, 80D, HRA exemption, etc.). Encourage your employees to submit their tax declarations early in the financial year so that TDS is spread evenly across months rather than being deducted in bulk toward year-end.

Tab 2: Payroll History

The Payroll History tab gives you a record of every payroll run your organization has processed. Use it to look up past months, download payslips, and generate statutory filing documents.

History Table

Each row in the table represents one payroll run with the following columns:

Column Description
Month / Year The pay period this run covers
Status Draft -- computed but not yet approved; Approved -- reviewed and locked; Locked -- finalized and payslips generated
Total Gross Sum of all gross salaries for that run
Total Net Sum of all net (take-home) pay for that run
Approved Date The date and time when the run was approved and locked
Actions View details, download payslips, and export statutory files

Available Downloads

Once a payroll run has been approved and locked, you can download the following files from the Actions column:

Payslips (PDF)

Individual payslip documents for each employee, showing their complete earnings and deductions breakdown for the month. Share these with employees as proof of salary payment.

Bank Salary File

A formatted file ready for upload to your bank's NEFT/RTGS portal. Contains each employee's bank account details and net pay amount for bulk salary transfer.

PF ECR File

Electronic Challan cum Return file for EPF (Employee Provident Fund) filing. Upload this directly to the EPFO portal to report monthly PF contributions.

ESI Contribution File

ESI contribution statement for filing with the ESIC portal. Contains employee-wise ESI contribution details for the month.

Tip Download and verify the PF ECR and ESI files immediately after approving payroll. Filing deadlines are strict -- PF returns are due by the 15th of the following month, and ESI returns by the 15th as well.

Tab 3: Salary Structures

Salary structures are reusable templates that define how an employee's CTC (Cost to Company) is split into individual salary components. Instead of manually entering each component for every employee, you assign a structure and the system handles the math.

How Structures Work

Each salary structure defines the percentage allocation for these components:

  • Basic -- the base salary, used as the foundation for PF and gratuity calculations
  • HRA (House Rent Allowance) -- typically a percentage of Basic, eligible for tax exemption if the employee pays rent
  • Conveyance Allowance -- for commuting and transportation expenses
  • Medical Allowance -- for healthcare-related expenses
  • Special Allowance -- the flexible component that absorbs the remaining CTC after all other heads are allocated

When you assign a structure to an employee and enter their monthly or annual CTC, the system automatically calculates the rupee value of each component based on the defined percentages.

Common Salary Structures

Most organizations need just two or three structures. Here are the most common configurations:

Standard CTC

The most widely used structure, balanced across all components.

Basic40% of CTC
HRA20% of CTC
Conveyance10% of CTC
Medical10% of CTC
Special20% of CTC

Basic Heavy

Higher Basic allocation -- increases PF contributions and gratuity but also raises the PF deduction.

Basic50% of CTC
HRA25% of CTC
Conveyance5% of CTC
Medical5% of CTC
Special15% of CTC
Tip Set up your salary structures once and reuse them across employees. Most companies need just 2-3 structures: one for junior staff, one for mid-level employees, and one for senior management. You can always create additional structures later if needed.

Assigning a Structure to an Employee

To assign a salary structure, go to the employee's profile in the Employee Directory, open the Compensation tab, and select the appropriate structure from the dropdown. Enter the employee's CTC, and the system will calculate the component-wise breakdown automatically.

After Payroll is Approved

Once you approve and lock a payroll run, several actions become available. Here's your post-approval checklist:

1

Download payslips -- generate individual PDF payslips for every employee and distribute them via email or the employee self-service portal.

2

Generate the bank salary file -- download the bulk NEFT/RTGS file and upload it to your bank's corporate internet banking portal to initiate salary transfers.

3

Generate the PF ECR file -- download the Electronic Challan cum Return file and upload it to the EPFO (Employees' Provident Fund Organisation) portal for monthly PF filing.

4

Generate the ESI contribution statement -- if any employees fall under ESI eligibility (Gross up to Rs.21,000/month), download the contribution file and submit it to the ESIC portal.

Tips and Best Practices

Before you approve: Double-check everything. Once a payroll run is locked, it cannot be unlocked or edited. If you discover an error after locking, you will need to process a correction in the next month's payroll run.
Attendance First Always finalize attendance and process leave for the month before computing payroll. The system calculates loss-of-pay deductions based on attendance data -- if attendance is incomplete, employees may see incorrect deductions in their payslips.
TDS Declarations: TDS is calculated based on each employee's annual projected income and their investment declarations under Section 80C, 80D, HRA exemption, and other applicable sections. Encourage employees to submit their investment declarations early in the financial year (April) so TDS is distributed evenly across all 12 months. Late declarations result in higher TDS in earlier months and adjustments later.
Monthly Routine For a smooth payroll cycle, follow this sequence each month: Mark attendance (1st-28th) → Process leave (by 28th) → Compute payroll (28th-30th) → Review and approve (30th-1st) → Disburse salaries and file returns (1st-7th of next month).
Need help with payroll setup or statutory configuration? Contact your Fuzen account manager or reach out at support@fuzen.io.